PreSSAPro


Output Form

Protein name: ApoMb bovine

Seq: GLSDGEWQLV LNAWGKVEAD VAGHGQEVLI RLFTGHPETL EKFDKFKHLK 50
Pred1: ccccchhhhc hhhhchhhhh hhccchhhch hhhccccchh hhhhhhhhhh
Pred2: ccccchheeh hhhhhhhhch hhcccceeee eeeecccchh hhhhhhchhh
Pred3: cccccchhhh hhhhchhhhc cccccceeee eeeccccchh hhhhhhhhhh
Pred4: ccccchhhhc hhhhhhhhhh hhcccchhcc eeeccccchh hhhhhhhhhh
Seq: TEAEMKASED LKKHGNTVLT ALGGILKKKG HHEAEVKHLA ESHANKHKIP 100
Pred1: hhhhhhhhhh hhhccceeeh hhcceehhcc chhhhhhhhh hhhhhccccc
Pred2: hhhhhhhhhh hhhccceeee ecccceeccc hhhhhhhhhh hhhhccccce
Pred3: hhhhhhhhhh hhcccceeee eecchhhhcc chhhhhhhhh hhhhhcccce
Pred4: hhhhhhhhhh hhhccceeee hhcccccccc chhhhhhhhh hhhhhccccc
Seq: VKYLEFISDA IIHVLHAKHP SDFGADAQAA MSKALELFRN DMAAQYKVLG 150
Pred1: chhhhhhhhh eeeeehhhcc ccccchhhhh hhhhhhhhhh hhhhhheeec
Pred2: eeeeehhhce eeeeeehhcc ccccchhhhh hhhhhhhhhh hhhhhheeee
Pred3: eeeeehhhee eeeeeehhcc ccccchhhhh hhhhhhhhhh hhhhhhheee
Pred4: chhhheehhh eeeeehhhcc ccccchhhhh hhhhhhhhhh hhhhhheeee
Seq: FHG 153
Pred1: ccc
Pred2: ccc
Pred3: ccc
Pred4: ccc


Pred1 is the secondary structure prediction obtained using the amino acid propensities calculated for all-alpha proteins.
Pred2 is the secondary structure prediction obtained using the amino acid propensities calculated for all-beta proteins.
Pred3 is the secondary structure prediction obtained using the amino acid propensities calculated for alpha-beta proteins.
Pred4 is the secondary structure prediction obtained using the amino acid propensities calculated for all proteins reported in PDBselect.