PreSSAPro


Output Form

Protein name: ApoMb horse

Seq: GLSDGEWQQV LNVWGKVEAD IAGHGQEVLI RLFTGHPETL EKFDKFKHLK 50
Pred1: ccccchhhhh hhhhchhhhh hhccchhhch hhhccccchh hhhhhhhhhh
Pred2: ccccchhhcc eeeeehhhch hhcccceeee eeeecccchh hhhhhhchhh
Pred3: cccccchhhe eeeechhhhc cccccceeee eeeccccchh hhhhhhhhhh
Pred4: ccccchhhhh eeeecchhhh hhcccchhcc eeeccccchh hhhhhhhhhh
Seq: TEAEMKASED LKKHGTVVLT ALGGILKKKG HHEAELKPLA QSHATKHKIP 100
Pred1: hhhhhhhhhh hhhcceeeeh hhcceehhcc chhhhhhhhh hhhhhhhhcc
Pred2: hhhhhhhhhh hhhcceeeee ecccceeccc hhhhhhhhhh hhhhhcccce
Pred3: hhhhhhhhhh hhccceeeee eccchhhhcc chhhhhhhhh hhhhhhhhce
Pred4: hhhhhhhhhh hhhcceeeee hhcccccccc chhhhhhhhh hhhhhccccc
Seq: IKYLEFISDA IIHVLHSKHP GDFGADAQGA MTKALELFRN DIAAKYKELG 150
Pred1: chhhhhhhhh eeeeeccccc ccccchhhhh hhhhhhhhhh hhhhhhhhcc
Pred2: eeeeehhhce eeeeeecccc cccccccchh hhhhhhhhhc hhhhhhhhcc
Pred3: eeeeehhhee eeeeeecccc cccccccchh hhhhhhhhhc hhhhhhhhcc
Pred4: cchhheehhh eeeeeccccc cccccccchh hhhhhhhhhh hhhhhhhhhh
Seq: FQG 153
Pred1: ccc
Pred2: ccc
Pred3: ccc
Pred4: ccc


Pred1 is the secondary structure prediction obtained using the amino acid propensities calculated for all-alpha proteins.
Pred2 is the secondary structure prediction obtained using the amino acid propensities calculated for all-beta proteins.
Pred3 is the secondary structure prediction obtained using the amino acid propensities calculated for alpha-beta proteins.
Pred4 is the secondary structure prediction obtained using the amino acid propensities calculated for all proteins reported in PDBselect.