PreSSAPro


Output Form

Protein name: Syrian hamster

Seq: GQGGGTHNQW NKPSKPKTNM KHMAGAAAAG AVVGGLGGYM LGSAMSRPMM 50
Pred1: cccccccccc ccccccccch hhhhhhhhhh heeccccccc ccchhhcccc
Pred2: cccccccccc cccccccccc hhhhhhhhcc eeecccccee ecchhhccce
Pred3: cccccccccc cccccccccc hhhhhhhhhc ceeccccccc ccchhhcccc
Pred4: cccccccccc ccccccccch hhhhhhhhhh heeccccccc ccchhhcccc
Seq: HFGNDWEDRY YRENMNRYPN QVYYRPVDQY NNQNNFVHDC VNITIKQHTV 100
Pred1: ccccchhhhe ehhhcccccc ceeeccchhh ccccceeecc ceeeehhhee
Pred2: ecccchhhhh hhhccccccc eeeeecchhh ccccceeeee eeeeeeeeee
Pred3: ccccchhhhh hhhhcccccc eeeeeccccc ccccceeeee eeeeeeeeee
Pred4: ccccchhhhe ehhhcccccc eeeecccccc ccccceeece eeeeeeccee
Seq: TTTTKGENFT ETDIKIMERV VEQMCTTQYQ KESQAYYDGR RS 142
Pred1: eeeeccccch hhhhhhhhhe ehhhhhhhhh hhhhheeccc cc
Pred2: eeeccccchh hcccceeehh heehhhchhh hhhhhhhccc cc
Pred3: eeeccccccc cheheheeeh heeehhhhhh hhhhhhhccc cc
Pred4: eeeecccccc ccccchhhhe ehhheehhhh hhhhheeccc cc


Pred1 is the secondary structure prediction obtained using the amino acid propensities calculated for all-alpha proteins.
Pred2 is the secondary structure prediction obtained using the amino acid propensities calculated for all-beta proteins.
Pred3 is the secondary structure prediction obtained using the amino acid propensities calculated for alpha-beta proteins.
Pred4 is the secondary structure prediction obtained using the amino acid propensities calculated for all proteins reported in PDBselect.